中国循证儿科杂志 ›› 2020, Vol. 15 ›› Issue (2): 130-134.

• 论著 • 上一篇    下一篇

基于宏基因组二代测序技术的儿童重症腺病毒7型肺炎20例病例系列报告

张甜1,陈名武1,2,张晓光1,朱昂昂1,王倩文2   

  1. 1 安徽医科大学附属省立医院儿科 合肥,230001;2 中国科学技术大学附属第一医院 合肥,230001
  • 收稿日期:2020-01-21 修回日期:2020-04-15 出版日期:2020-04-25 发布日期:2020-04-25
  • 通讯作者: 陈名武

Severe type 7 adenovirus pneumonia in 20 childre by metagenomic next-generation sequencing: A case series report

ZHANG Tian1, CHEN Ming-wu1,2, ZHANG Xiao-guang1, ZHU Ang-ang1, WANG Qian-wen2   

  1. 1 Department of Pediatrics, Anhui Provincial Hospital Affiliated to Anhui Medical University, Hefei 230001, China; 2 The First Affiliated Hospital of University of Science and Technology of China, Hefei 230001, China
  • Received:2020-01-21 Revised:2020-04-15 Online:2020-04-25 Published:2020-04-25
  • Contact: CHEN Ming-wu

摘要: 目的 探讨儿童重症腺病毒7型(HAdV-7)肺炎的临床特征及宏基因组二代测序(mNGS)技术在其病原学诊断中的应用。方法 回顾性分析2019年1月1日至11月30日于安徽医科大学附属省立医院儿科住院治疗且经肺泡灌洗液或血液病原菌mNGS技术确诊的重症HAdV-7肺炎患儿的临床资料和病原学mNGS结果。结果 20例患儿进入分析,男17例,发病年龄以0.5~2岁多见(60.0%);体温>39℃ 19例,总热程>10 d 16例,均有咳嗽,喘息15例。并发症:中毒性脑病1例,心力衰竭7例,呼吸衰竭5例,胸腔积液5例;入院时WBC计数为(8.6±4.3)×109·L-1,其中>10×109·L-1者6例,<4×109·L-1者2例;中性粒细胞百分比(55.9±13.1)%;CRP中位数10.9(5.6,23.7)mg·L-1,>30 mg·L-1者2例。病情加重时(如出现低氧血症或呼吸困难)WBC计数中位数为8.3(3.1,17.6)×109·L-1,>10×109·L-1者8例,<4×109·L-1者6例;中性粒细胞百分比(65.4±17.2)%,增高16例;CRP中位数为26.5(12.2,65.9)mg·L-1,>30 mg·L-1者8例。肺部CT提示双肺实变影和支气管充气征各17例。19例好转出院,1例死亡。HAdV-7 DNA检出序列中位数为1 6710(892.0,2 467.8),覆盖度中位数为98.9(89.8,99.1)%。10例行血液mNGS检测的检出序列中位数为1 152.0(3478,1 991.5),覆盖度中位数为98.8(81.6,99.1)%。10例行肺泡灌洗液mNGS检测的检出序列中位数和覆盖度分别为2 033.5(1 263.2,2 901.8)和99.0(89.9,99.2)%;单一腺病毒检出13例(65.0%),混合病原体检出7例(35.0%)。结论 血液及肺泡灌洗液病原菌mNGS技术可准确鉴定HAdV-7感染,当<2岁婴幼儿出现持续性高热、咳嗽、喘息,伴WBC升高或降低,分类以中性粒细胞为主,同时CRP增高,胸部CT有双肺实变影及支气管充气征时,应警惕HAdV-7感染引起的重症肺炎和并发症,尽早完善mNGS检查。

Abstract: Objective To explore the clinical characteristics of severe pneumonia in children caused by human adenovirus type 7 (HAdV7) and the application of metagenomic next-generation sequencing (mNGS) in etiological diagnosis. Methods The patients with severe pneumonia associated with HAdV7 infection were enrolled from Pediatric Department of Anhui Provincial Hospital Affiliated to Anhui Medical University from January 2019 to November 2019. HAdV7 infection was identified by mNGS of blood or alveolar lavage fluid. The clinical data and results of mNGS of included patients were retrospectively analyzed. Results Twenty patients were included, and 17 of them were males. Twelve cases (60%) were aged from 6 months to 2 years, which was the most common age group. A total of 19 cases had high fever (>39 ℃). Fever duration of 16 cases was more than 10 days. There were 15 cases with both of cough and wheezing. Complications included toxic encephalopathy in 1 case, heart failure in 7 cases, respiratory failure in 5 cases and pleural effusion in 5 cases. On admission, WBC was (8.6±4.3)×109·L-1, and there were 6 cases with more than 10×109·L-1 and 2 cases with less than 4×109·L-1. The percentage of neutrophils was (55.9±131)%. The median of C-reactive protein was 10.9 (5.6, 23.7) mg·L-1, and there were 2 cases with more than 30 mg·L-1. As the disease aggravated such as hypoxemia or dyspnea, the median of WBC was 8.3 (3.1, 17.6) ×109·L-1, and there were 8 cases with more than 10×109·L-1 and 6 cases with less than 4×109·L-1; the percentage of neutrophils became (65.4±17.2)%, and there was an increase in 16 cases; the median of C-reactive protein became 26.5 (12.2, 65.9) mg·L-1, and there were 8 cases with more than 30 mg·L-1. Chest CT showed consolidation and air bronchogram in bilateral lungs were found in 17 cases respectively. Nineteen cases improved and 1 case died. The median of identified HAdV7 DNA sequences was 1,671.0 (892.0, 2 467.8) and the coverage rates were 98.9(89.8, 99.1)%. Of the 20 cases, 10 were performed mNGS of blood and 10 were performed mNGS of alveolar lavage fluid. The median of the identified reads of the two groups were 1,152.0 (347.8, 1,991.5) and 2,033.5 (1,263.2,2,901.8), and the coverage rates were 98.9(81.6, 99.1)% and 99.0(89.9, 99.2)%, respectively. Thirteen cases were affected by HAdV7 infection alone, and 7 cases were affected by mixed infection. Conclusion mNGS of blood or alveolar lavage fluid could identify HAdV7 infection accurately. Doctors should be aware of severe pneumonia and complications caused by HAdV7 infection and perform mNGS as soon as possible, when infants younger than 2 years old had persistent high fever, cough, wheezing, increased or decreased WBC focusing on neutrophils, high C-reactive protein and consolidation and air bronchogram in bilateral lungs shown by chest CT.